Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_26090 | Not Available | Positive | 5649097 - 5649435 | 11167.1 |
| lysr family transcriptional regulator | RT97_26095 | Not Available | Negative | 5649467 - 5650438 | 35205.4 |
| aldehyde oxidoreductase | RT97_26100 | Not Available | Positive | 5650638 - 5651297 | 22496.3 |
| molybdopterin dehydrogenase | RT97_26105 | Not Available | Positive | 5651294 - 5652253 | 33832.4 |
| xanthine dehydrogenase | RT97_26110 | Not Available | Positive | 5652257 - 5654455 | 78135.5 |
| hypothetical protein | RT97_26115 | Not Available | Positive | 5654533 - 5654931 | 14801.0 |
| gnat family acetyltransferase | RT97_26120 | Not Available | Negative | 5655051 - 5655515 | 17576.8 |
| fad-dependent oxidoreductase | RT97_26125 | Not Available | Negative | 5655557 - 5656969 | 52257.3 |
| polyketide cyclase | RT97_26130 | Not Available | Negative | 5657101 - 5657511 | 14727.2 |
| gntr family transcriptional regulator | RT97_26135 | Not Available | Positive | 5657657 - 5659195 | 57121.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
