Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsx | RT97_26040 | Not Available | Positive | 5639661 - 5640917 | 45515.1 |
| lipoprotein abc transporter atp-binding protein | RT97_26045 | Not Available | Positive | 5640892 - 5641587 | 24817.2 |
| metal abc transporter permease | RT97_26050 | Not Available | Negative | 5641720 - 5643552 | 67837.6 |
| thioesterase | RT97_26055 | Not Available | Positive | 5643594 - 5644022 | 15432.6 |
| abc transporter substrate-binding protein | RT97_26060 | Not Available | Negative | 5644063 - 5645184 | 40709.6 |
| enoyl-coa hydratase | RT97_26065 | Not Available | Negative | 5645367 - 5646131 | 27041.1 |
| dsba oxidoreductase | RT97_26070 | Not Available | Negative | 5646175 - 5646768 | 21653.0 |
| glucose 1-dehydrogenase | RT97_26075 | Not Available | Negative | 5646798 - 5647544 | 27024.4 |
| acyl-coa thioesterase | RT97_26080 | Not Available | Negative | 5647549 - 5648385 | 30213.7 |
| dna-binding protein | RT97_26085 | Not Available | Negative | 5648514 - 5649005 | 16899.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
