Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| maltodextrin phosphorylase | RT97_25985 | Not Available | Negative | 5625729 - 5628212 | 93069.0 |
| glycogen synthase | RT97_25990 | Not Available | Negative | 5628259 - 5629734 | 53115.5 |
| glucose-1-phosphate adenylyltransferase | RT97_25995 | Not Available | Negative | 5629752 - 5631020 | 46789.2 |
| glycogen debranching protein | RT97_26000 | Not Available | Negative | 5631139 - 5633217 | 75665.8 |
| hypothetical protein | RT97_26005 | Not Available | Positive | 5633371 - 5633568 | 6754.1 |
| hypothetical protein | RT97_26010 | Not Available | Positive | 5633627 - 5634277 | 22985.9 |
| hypothetical protein | RT97_26020 | Not Available | Negative | 5635706 - 5636098 | 14515.3 |
| hypothetical protein | RT97_26025 | Not Available | Positive | 5636501 - 5636773 | 9787.99 |
| single-stranded dna exonuclease | RT97_26030 | Not Available | Negative | 5636835 - 5638556 | 61562.4 |
| hypothetical protein | RT97_26035 | Not Available | Negative | 5638553 - 5639515 | 34215.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
