Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fur family transcriptional regulator | RT97_25830 | Not Available | Positive | 5572921 - 5573370 | 16256.3 |
| 50s ribosomal protein l36 | RT97_25835 | Not Available | Positive | 5573462 - 5573611 | 5781.14 |
| abc transporter atp-binding protein | RT97_25840 | Not Available | Positive | 5573740 - 5574447 | 25394.7 |
| abc transporter permease | RT97_25845 | Not Available | Positive | 5574453 - 5575850 | 51297.1 |
| abc transporter permease | RT97_25850 | Not Available | Positive | 5575870 - 5577345 | 53404.2 |
| tonb-dependent receptor | RT97_25855 | Not Available | Positive | 5577391 - 5579571 | 79103.3 |
| hypothetical protein | RT97_25860 | Not Available | Negative | 5579582 - 5581240 | 58718.5 |
| phenylacetic acid degradation protein | RT97_25865 | Not Available | Positive | 5581480 - 5581908 | 14953.0 |
| hypothetical protein | RT97_25870 | Not Available | Positive | 5582538 - 5603408 | 689804.0 |
| transporter | RT97_25875 | Not Available | Positive | 5603532 - 5605043 | 55721.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
