Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_02540 | Not Available | Negative | 539035 - 539832 | 29746.9 |
| fad-dependent oxidoreductase | RT97_02545 | Not Available | Positive | 540162 - 541265 | 37954.5 |
| hypothetical protein | RT97_02550 | Not Available | Positive | 541396 - 541692 | 10300.4 |
| membrane protein | RT97_02555 | Not Available | Positive | 541762 - 542481 | 26489.4 |
| dihydroorotate dehydrogenase | RT97_02560 | Not Available | Negative | 542497 - 543573 | 37759.5 |
| ribose 5-phosphate isomerase | RT97_02565 | Not Available | Positive | 543614 - 544327 | 24786.9 |
| glutaredoxin | RT97_02570 | Not Available | Negative | 544347 - 544991 | 22409.5 |
| oligopeptidase a | RT97_02575 | Not Available | Negative | 545022 - 547079 | 76163.9 |
| methenyltetrahydrofolate cyclohydrolase | RT97_02580 | Not Available | Negative | 547085 - 547936 | 29615.3 |
| luxr family transcriptional regulator | RT97_02585 | Not Available | Negative | 548013 - 548645 | 23285.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
