Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_25680 | Not Available | Negative | 5547897 - 5548112 | 7882.04 |
| hypothetical protein | RT97_25685 | Not Available | Negative | 5548150 - 5549346 | 41670.2 |
| hypothetical protein | RT97_25690 | Not Available | Positive | 5549448 - 5549723 | 10594.5 |
| hypothetical protein | RT97_25695 | Not Available | Positive | 5549793 - 5550221 | 15682.1 |
| enoyl-coa hydratase | RT97_25700 | Not Available | Positive | 5550283 - 5551080 | 28312.9 |
| hypothetical protein | RT97_25705 | Not Available | Negative | 5551108 - 5552211 | 39542.6 |
| major facilitator transporter | RT97_25710 | Not Available | Negative | 5552250 - 5553563 | 46378.6 |
| lysr family transcriptional regulator | RT97_25715 | Not Available | Positive | 5553709 - 5554599 | 32304.7 |
| glutathione s-transferase | RT97_25720 | Not Available | Negative | 5554596 - 5555252 | 24443.4 |
| arac family transcriptional regulator | RT97_25725 | Not Available | Positive | 5555321 - 5556190 | 30442.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
