Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_25480 | Not Available | Positive | 5507893 - 5508378 | 16954.0 |
| hypothetical protein | RT97_25485 | Not Available | Negative | 5508389 - 5509294 | 32031.5 |
| glutathione s-transferase | RT97_25490 | Not Available | Negative | 5509399 - 5510337 | 34544.5 |
| acyl-coa dehydrogenase | RT97_25495 | Not Available | Negative | 5510366 - 5512006 | 59047.9 |
| 2-alkenal reductase | RT97_25500 | Not Available | Negative | 5512038 - 5513054 | 35984.5 |
| phenylacetic acid degradation protein | RT97_25505 | Not Available | Negative | 5513076 - 5513510 | 15776.8 |
| gluconate 5-dehydrogenase | RT97_25510 | Not Available | Negative | 5513660 - 5514457 | 28011.8 |
| stress responsive protein | RT97_25515 | Not Available | Negative | 5514489 - 5514791 | 11015.3 |
| hypothetical protein | RT97_25520 | Not Available | Negative | 5514815 - 5515051 | 8420.6 |
| acyl-coa dehydrogenase | RT97_25525 | Not Available | Negative | 5515054 - 5516910 | 67106.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
