Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | RT97_25420 | Not Available | Negative | 5496737 - 5497699 | 34797.1 |
| arabinose transporter permease | RT97_25425 | Not Available | Positive | 5497791 - 5498981 | 40479.0 |
| dienelactone hydrolase | RT97_25430 | Not Available | Negative | 5498991 - 5499818 | 29854.7 |
| arac family transcriptional regulator | RT97_25435 | Not Available | Positive | 5499921 - 5500901 | 34702.2 |
| gcn5 family acetyltransferase | RT97_25440 | Not Available | Positive | 5500984 - 5501478 | 18269.8 |
| hypothetical protein | RT97_25445 | Not Available | Negative | 5501475 - 5501891 | 14639.8 |
| nad(p)h dehydrogenase | RT97_25460 | Not Available | Negative | 5504499 - 5505233 | 26834.6 |
| lysr family transcriptional regulator | RT97_25465 | Not Available | Positive | 5505352 - 5506278 | 33214.9 |
| tetr family transcriptional regulator | RT97_25470 | Not Available | Negative | 5506289 - 5506951 | 24433.7 |
| nmra family transcriptional regulator | RT97_25475 | Not Available | Positive | 5507078 - 5507890 | 29087.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
