Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_25320 | Not Available | Positive | 5474396 - 5475691 | 47191.3 |
| hypothetical protein | RT97_25325 | Not Available | Positive | 5475716 - 5476063 | 12831.7 |
| hypothetical protein | RT97_25330 | Not Available | Negative | 5476082 - 5476660 | 21231.0 |
| hypothetical protein | RT97_25335 | Not Available | Negative | 5476677 - 5477324 | 23074.6 |
| membrane protein | RT97_25340 | Not Available | Negative | 5477324 - 5479432 | 75038.2 |
| hypothetical protein | RT97_25345 | Not Available | Negative | 5479443 - 5480138 | 25054.9 |
| pyridoxamine 5'-phosphate oxidase | RT97_25350 | Not Available | Negative | 5480283 - 5480903 | 22147.7 |
| mfs transporter | RT97_25355 | Not Available | Negative | 5480900 - 5482027 | 39674.4 |
| lysr family transcriptional regulator | RT97_25360 | Not Available | Positive | 5482160 - 5483062 | 32794.5 |
| nmra family transcriptional regulator | RT97_25365 | Not Available | Negative | 5483040 - 5483897 | 30240.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
