Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_25270 | Not Available | Negative | 5462837 - 5463472 | 21984.1 |
| mammalian cell entry protein | RT97_25275 | Not Available | Negative | 5463472 - 5465136 | 60805.9 |
| paraquat-inducible protein a | RT97_25280 | Not Available | Negative | 5465133 - 5465873 | 26934.8 |
| paraquat-inducible protein a | RT97_25285 | Not Available | Negative | 5465870 - 5466505 | 22828.7 |
| multidrug mfs transporter | RT97_25290 | Not Available | Negative | 5466526 - 5467935 | 48150.1 |
| major facilitator transporter | RT97_25295 | Not Available | Negative | 5467983 - 5469197 | 42052.6 |
| monooxygenase | RT97_25300 | Not Available | Negative | 5469269 - 5470600 | 49215.2 |
| methyltransferase | RT97_25305 | Not Available | Negative | 5470605 - 5471438 | 31806.6 |
| glucose 1-dehydrogenase | RT97_25310 | Not Available | Negative | 5471476 - 5472207 | 25364.2 |
| peptidase m48 | RT97_25315 | Not Available | Positive | 5472474 - 5474336 | 68865.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
