Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_25215 | Not Available | Positive | 5450028 - 5450603 | 20940.6 |
| multidrug transporter mate | RT97_25220 | Not Available | Positive | 5450693 - 5452051 | 47669.4 |
| 3-demethylubiquinone-9 3-methyltransferase | RT97_25225 | Not Available | Negative | 5452071 - 5452550 | 17796.4 |
| amidohydrolase | RT97_25230 | Not Available | Negative | 5452713 - 5453534 | 30278.2 |
| 2-hydroxyacid dehydrogenase | RT97_25235 | Not Available | Negative | 5453572 - 5454564 | 34771.6 |
| laci family transcriptional regulator | RT97_25240 | Not Available | Negative | 5454703 - 5455740 | 37456.2 |
| c4-dicarboxylate abc transporter permease | RT97_25245 | Not Available | Negative | 5455763 - 5457652 | 66785.0 |
| c4-dicarboxylate abc transporter substrate-binding protein | RT97_25250 | Not Available | Negative | 5457659 - 5458693 | 37531.5 |
| hypothetical protein | RT97_25255 | Not Available | Positive | 5458878 - 5459390 | 18764.0 |
| major facilitator transporter | RT97_25265 | Not Available | Negative | 5461077 - 5462681 | 54403.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
