Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dioxygenase | RT97_25165 | Not Available | Negative | 5440722 - 5442053 | 49754.6 |
| gntr family transcriptional regulator | RT97_25170 | Not Available | Positive | 5442339 - 5443073 | 27090.8 |
| tetr family transcriptional regulator | RT97_25175 | Not Available | Positive | 5443160 - 5443783 | 22357.2 |
| amidase | RT97_25180 | Not Available | Negative | 5443790 - 5445136 | 46825.3 |
| metallophosphoesterase | RT97_25185 | Not Available | Negative | 5445366 - 5446172 | 29877.4 |
| lysr family transcriptional regulator | RT97_25190 | Not Available | Negative | 5446487 - 5447467 | 35890.4 |
| hypothetical protein | RT97_25195 | Not Available | Positive | 5447578 - 5448120 | 19556.6 |
| hypothetical protein | RT97_25200 | Not Available | Positive | 5448546 - 5449061 | 19617.7 |
| arsr family transcriptional regulator | RT97_25205 | Not Available | Positive | 5449134 - 5449496 | 13784.5 |
| asnc family transcriptional regulator | RT97_25210 | Not Available | Positive | 5449496 - 5449945 | 15956.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
