Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase | RT97_25115 | Not Available | Positive | 5430845 - 5432422 | 58157.7 |
| abc transporter substrate-binding protein | RT97_25120 | Not Available | Positive | 5432509 - 5433666 | 39912.3 |
| hypothetical protein | RT97_25125 | Not Available | Positive | 5433765 - 5434130 | 13021.3 |
| abc transporter atp-binding protein | RT97_25130 | Not Available | Negative | 5434206 - 5434943 | 26676.4 |
| hemolysin iii | RT97_25135 | Not Available | Negative | 5434936 - 5435706 | 27558.5 |
| abc transporter permease | RT97_25140 | Not Available | Negative | 5435703 - 5436665 | 34232.1 |
| abc transporter permease | RT97_25145 | Not Available | Negative | 5436662 - 5437522 | 30122.3 |
| abc transporter substrate-binding protein | RT97_25150 | Not Available | Negative | 5437569 - 5438768 | 43118.5 |
| ferredoxin | RT97_25155 | Not Available | Negative | 5438818 - 5439141 | 11368.6 |
| glutamine synthetase | RT97_25160 | Not Available | Negative | 5439259 - 5440710 | 53528.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
