Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_25065 | Not Available | Negative | 5421008 - 5421499 | 18049.9 |
| lysr family transcriptional regulator | RT97_25070 | Not Available | Negative | 5421525 - 5422433 | 32695.7 |
| membrane protein | RT97_25075 | Not Available | Positive | 5422529 - 5423524 | 35835.2 |
| glutaminase | RT97_25080 | Not Available | Negative | 5423614 - 5424543 | 32753.3 |
| multidrug dmt transporter permease | RT97_25085 | Not Available | Negative | 5424552 - 5425460 | 33013.1 |
| transporter | RT97_25090 | Not Available | Negative | 5425480 - 5425986 | 18242.9 |
| flavin reductase | RT97_25095 | Not Available | Negative | 5425986 - 5426495 | 18045.4 |
| lysr family transcriptional regulator | RT97_25100 | Not Available | Negative | 5426537 - 5427457 | 33228.5 |
| hypothetical protein | RT97_25105 | Not Available | Positive | 5427565 - 5429538 | 71444.2 |
| membrane protein | RT97_25110 | Not Available | Negative | 5429546 - 5430775 | 43181.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
