Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gluconolaconase | RT97_25015 | Not Available | Negative | 5412545 - 5413462 | 31936.9 |
| hypothetical protein | RT97_25020 | Not Available | Negative | 5413627 - 5414358 | 27700.5 |
| gnat family acetyltransferase | RT97_25025 | Not Available | Negative | 5414627 - 5415058 | 16043.4 |
| ketosteroid isomerase | RT97_25030 | Not Available | Negative | 5415085 - 5415450 | 13587.3 |
| hypothetical protein | RT97_25035 | Not Available | Negative | 5415537 - 5415781 | 8878.76 |
| mfs transporter | RT97_25040 | Not Available | Positive | 5415782 - 5416350 | 18838.2 |
| monooxygenase | RT97_25045 | Not Available | Negative | 5416358 - 5418067 | 63015.3 |
| abc transporter substrate-binding protein | RT97_25050 | Not Available | Negative | 5418105 - 5419064 | 32680.9 |
| lysr family transcriptional regulator | RT97_25055 | Not Available | Positive | 5419215 - 5420054 | 30541.0 |
| abc transporter substrate-binding protein | RT97_25060 | Not Available | Negative | 5420055 - 5420594 | 19001.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
