Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| clp protease clpp | RT97_24910 | Not Available | Negative | 5392405 - 5393013 | 22268.9 |
| trigger factor | RT97_24915 | Not Available | Negative | 5393127 - 5394446 | 48821.0 |
| Trna-leu | Not Available | Not Available | Positive | 5394473 - 5394559 | Not Available |
| multidrug transporter acrb | RT97_24925 | Not Available | Negative | 5394673 - 5397843 | 115122.0 |
| rnd transporter | RT97_24930 | Not Available | Negative | 5397840 - 5398517 | 22650.0 |
| hypothetical protein | RT97_24935 | Not Available | Negative | 5398518 - 5398962 | 16365.8 |
| penicillin-binding protein | RT97_24945 | Not Available | Negative | 5400551 - 5402806 | 81155.5 |
| hypothetical protein | RT97_24950 | Not Available | Positive | 5403070 - 5403270 | 7335.56 |
| lysine transporter lyse | RT97_24955 | Not Available | Negative | 5403335 - 5403961 | 22125.7 |
| aldehyde-activating protein | RT97_24960 | Not Available | Negative | 5404023 - 5404424 | 14411.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
