Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate racemase | RT97_24860 | Not Available | Positive | 5382208 - 5383005 | 27387.0 |
| hypothetical protein | RT97_24865 | Not Available | Positive | 5383020 - 5383802 | 29000.7 |
| 5'-nucleotidase | RT97_24870 | Not Available | Positive | 5383891 - 5386095 | 74779.8 |
| mfs transporter | RT97_24875 | Not Available | Negative | 5386097 - 5387401 | 45764.5 |
| hypothetical protein | RT97_24880 | Not Available | Negative | 5387433 - 5388074 | 23632.5 |
| Trna-leu | Not Available | Not Available | Positive | 5388096 - 5388187 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 5388286 - 5388359 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 5388423 - 5388498 | Not Available |
| dna-binding protein | RT97_24900 | Not Available | Negative | 5388553 - 5390994 | 89357.9 |
| clp protease atp-binding protein | RT97_24905 | Not Available | Negative | 5391018 - 5392283 | 46254.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
