Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal transduction histidine kinase | RT97_24810 | Not Available | Negative | 5369821 - 5370327 | 18719.8 |
| amp-dependent synthetase | RT97_24815 | Not Available | Negative | 5370713 - 5372710 | 72678.9 |
| membrane protein | RT97_24820 | Not Available | Positive | 5372858 - 5373493 | 22934.5 |
| lysr family transcriptional regulator | RT97_24825 | Not Available | Negative | 5373518 - 5374438 | 33534.4 |
| 3-beta hydroxysteroid dehydrogenase | RT97_24830 | Not Available | Positive | 5374539 - 5375156 | 21832.0 |
| fumarate hydratase | RT97_24835 | Not Available | Negative | 5375213 - 5376610 | 49613.1 |
| glycine/betaine abc transporter atp-binding protein | RT97_24840 | Not Available | Positive | 5377110 - 5378363 | 44989.2 |
| abc transporter permease | RT97_24845 | Not Available | Positive | 5378385 - 5379542 | 40583.5 |
| glycine/betaine abc transporter substrate-binding protein | RT97_24850 | Not Available | Positive | 5379566 - 5380570 | 36591.5 |
| fumarate hydratase | RT97_24855 | Not Available | Positive | 5380650 - 5382203 | 55296.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
