Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_24710 | Not Available | Positive | 5351260 - 5351484 | 8311.86 |
| cell division protein zapa | RT97_24715 | Not Available | Positive | 5351481 - 5351825 | 11685.1 |
| membrane protein | RT97_24720 | Not Available | Positive | 5352108 - 5352929 | 28112.5 |
| universal stress protein uspa | RT97_24725 | Not Available | Positive | 5353008 - 5353433 | 15134.3 |
| arac family transcriptional regulator | RT97_24730 | Not Available | Negative | 5353441 - 5354403 | 35292.0 |
| amidohydrolase | RT97_24735 | Not Available | Positive | 5354570 - 5355604 | 37114.0 |
| phenylacetaldoxime dehydratase | RT97_24740 | Not Available | Positive | 5355622 - 5356683 | 39740.8 |
| beta-lactamase | RT97_24745 | Not Available | Positive | 5356751 - 5358454 | 63731.1 |
| malonyl-coa synthase | RT97_24750 | Not Available | Negative | 5358461 - 5359996 | 55535.0 |
| enoyl-coa hydratase | RT97_24755 | Not Available | Negative | 5360020 - 5360769 | 26365.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
