Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methylmalonyl-coa carboxyltransferase | RT97_02440 | Not Available | Positive | 519359 - 520903 | 56624.4 |
| acetyl-coa carboxylase | RT97_02445 | Not Available | Positive | 520924 - 522972 | 74173.0 |
| biotin synthase | RT97_02450 | Not Available | Positive | 522972 - 524003 | 37077.6 |
| lactoylglutathione lyase | RT97_02455 | Not Available | Positive | 524000 - 524485 | 17485.3 |
| arsr family transcriptional regulator | RT97_02460 | Not Available | Negative | 524597 - 525094 | 18164.1 |
| permease | RT97_02465 | Not Available | Positive | 525215 - 526126 | 31963.3 |
| lysine transporter lyse | RT97_02470 | Not Available | Negative | 526153 - 526791 | 22404.2 |
| ferredoxin | RT97_02475 | Not Available | Negative | 526788 - 527423 | 22241.5 |
| esterase | RT97_02480 | Not Available | Negative | 527441 - 528877 | 53669.1 |
| aromatic amino acid aminotransferase | RT97_02485 | Not Available | Negative | 529035 - 530231 | 42688.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
