Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_24660 | Not Available | Negative | 5342045 - 5342377 | 11827.2 |
| biopolymer transporter exbd | RT97_24665 | Not Available | Negative | 5342398 - 5342871 | 17326.7 |
| cob(ii)yrinic acid a,c-diamide reductase | RT97_24670 | Not Available | Negative | 5342871 - 5343566 | 25923.2 |
| cobinamide adenolsyltransferase | RT97_24675 | Not Available | Negative | 5343572 - 5344141 | 20950.4 |
| abc transporter | RT97_24680 | Not Available | Negative | 5344156 - 5344929 | 27985.7 |
| abc transporter permease | RT97_24685 | Not Available | Negative | 5344926 - 5345951 | 34356.5 |
| abc transporter substrate-binding protein | RT97_24690 | Not Available | Negative | 5345948 - 5346817 | 31094.9 |
| adenosylcobinamide-phosphate guanylyltransferase | RT97_24695 | Not Available | Negative | 5346817 - 5347413 | 21517.4 |
| cobyrinic acid a,c-diamide synthase | RT97_24700 | Not Available | Negative | 5347382 - 5348806 | 49638.3 |
| tonb-dependent receptor | RT97_24705 | Not Available | Negative | 5348791 - 5350725 | 69263.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
