Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoquinoline 1-oxidoreductase subunit | RT97_24610 | Not Available | Positive | 5330719 - 5331336 | 22123.4 |
| peroxiredoxin | RT97_24615 | Not Available | Negative | 5331617 - 5332090 | 17652.8 |
| hypothetical protein | RT97_24620 | Not Available | Negative | 5332121 - 5332960 | 30325.2 |
| hypothetical protein | RT97_24625 | Not Available | Positive | 5333122 - 5334063 | 32355.1 |
| hypothetical protein | RT97_24630 | Not Available | Positive | 5334076 - 5334921 | 30389.6 |
| membrane protein | RT97_24635 | Not Available | Negative | 5334925 - 5335653 | 24908.6 |
| murein hydrolase transporter lrga | RT97_24640 | Not Available | Negative | 5335650 - 5336003 | 12854.5 |
| aminotransferase | RT97_24645 | Not Available | Negative | 5336008 - 5337018 | 36325.8 |
| cobalamin biosynthesis protein cobd | RT97_24650 | Not Available | Negative | 5337015 - 5337983 | 35000.0 |
| cobalt chelatase | RT97_24655 | Not Available | Negative | 5338005 - 5342048 | 145466.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
