Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_24560 | Not Available | Negative | 5317245 - 5317481 | 8461.34 |
| hypothetical protein | RT97_24565 | Not Available | Positive | 5317681 - 5318082 | 15189.6 |
| hypothetical protein | RT97_24570 | Not Available | Positive | 5318140 - 5318427 | 10304.9 |
| hypothetical protein | RT97_24575 | Not Available | Positive | 5319828 - 5321219 | 51850.5 |
| transporter | RT97_24580 | Not Available | Negative | 5321342 - 5324360 | 107915.0 |
| rnd transporter mfp subunit | RT97_24585 | Not Available | Negative | 5324525 - 5325781 | 44245.7 |
| alpha/beta hydrolase | RT97_24590 | Not Available | Negative | 5325933 - 5326820 | 30641.4 |
| lysr family transcriptional regulator | RT97_24595 | Not Available | Positive | 5327002 - 5327916 | 33983.7 |
| isoquinoline 1-oxidoreductase | RT97_24600 | Not Available | Positive | 5328052 - 5328513 | 16541.1 |
| aldehyde oxidase | RT97_24605 | Not Available | Positive | 5328536 - 5330722 | 77682.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
