Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_24510 | Not Available | Positive | 5304049 - 5305743 | 61183.6 |
| peptidase m14 | RT97_24515 | Not Available | Negative | 5305752 - 5307455 | 64492.8 |
| amidohydrolase | RT97_24520 | Not Available | Positive | 5307535 - 5308425 | 32535.9 |
| abc transporter permease | RT97_24525 | Not Available | Positive | 5308543 - 5309688 | 40532.6 |
| iclr family transcriptional regulator | RT97_24530 | Not Available | Negative | 5309704 - 5310474 | 27671.5 |
| laci family transcriptional regulator | RT97_24535 | Not Available | Positive | 5310606 - 5311574 | 33597.6 |
| enoyl-coa hydratase | RT97_24540 | Not Available | Positive | 5311588 - 5312400 | 28339.9 |
| 6-carboxyhexanoate--coa ligase | RT97_24545 | Not Available | Positive | 5312418 - 5314517 | 72161.1 |
| 3-phosphoglycerate dehydrogenase | RT97_24550 | Not Available | Negative | 5314539 - 5315522 | 35530.3 |
| hypothetical protein | RT97_24555 | Not Available | Negative | 5315543 - 5316532 | 34884.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
