Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribulose 1,5-bisphosphate carboxylase | RT97_24460 | Not Available | Positive | 5294989 - 5296266 | 44953.5 |
| lipoprotein | RT97_24465 | Not Available | Positive | 5296263 - 5297597 | 45805.8 |
| hypothetical protein | RT97_24470 | Not Available | Negative | 5297628 - 5297900 | 10493.1 |
| amino acid transporter | RT97_24475 | Not Available | Positive | 5298060 - 5298293 | 8496.46 |
| hemerythrin | RT97_24480 | Not Available | Positive | 5298403 - 5298894 | 18482.1 |
| isochorismatase | RT97_24485 | Not Available | Positive | 5298897 - 5299502 | 21885.6 |
| general stress protein | RT97_24490 | Not Available | Positive | 5299663 - 5300163 | 18063.2 |
| hypothetical protein | RT97_24495 | Not Available | Positive | 5300223 - 5302403 | 77948.5 |
| serine protease | RT97_24500 | Not Available | Positive | 5302476 - 5303432 | 32629.1 |
| hypothetical protein | RT97_24505 | Not Available | Negative | 5303584 - 5303814 | 8302.08 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
