Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phospholipase | RT97_24410 | Not Available | Negative | 5283398 - 5285014 | 59541.3 |
| hypothetical protein | RT97_24415 | Not Available | Negative | 5285135 - 5285410 | 10028.9 |
| hypothetical protein | RT97_24420 | Not Available | Positive | 5285679 - 5286080 | 16060.0 |
| alpha-ketoglutarate-dependent dioxygenase | RT97_24425 | Not Available | Positive | 5286121 - 5286768 | 22993.4 |
| multidrug abc transporter atpase | RT97_24430 | Not Available | Positive | 5286868 - 5288580 | 61642.6 |
| hypothetical protein | RT97_24435 | Not Available | Negative | 5288588 - 5290057 | 52786.0 |
| laci family transcriptional regulator | RT97_24440 | Not Available | Negative | 5290300 - 5291355 | 38348.2 |
| abc transporter substrate-binding protein | RT97_24445 | Not Available | Positive | 5291479 - 5292507 | 37361.9 |
| abc transporter permease | RT97_24450 | Not Available | Positive | 5292514 - 5294409 | 66413.6 |
| glyoxalase | RT97_24455 | Not Available | Positive | 5294447 - 5294986 | 20240.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
