Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| poly(r)-hydroxyalkanoic acid synthase | RT97_24360 | Not Available | Negative | 5277043 - 5277670 | 22394.2 |
| hypothetical protein | RT97_24365 | Not Available | Positive | 5277784 - 5278107 | 11323.9 |
| laccase | RT97_24370 | Not Available | Negative | 5278039 - 5278833 | 27660.6 |
| maleylacetoacetate isomerase | RT97_24375 | Not Available | Negative | 5278834 - 5279472 | 23867.4 |
| hypothetical protein | RT97_24380 | Not Available | Negative | 5279504 - 5280412 | 33173.6 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | RT97_24385 | Not Available | Positive | 5280570 - 5281271 | 24935.8 |
| adp-ribose pyrophosphatase | RT97_24390 | Not Available | Positive | 5281289 - 5281840 | 20892.0 |
| crea | RT97_24395 | Not Available | Positive | 5281849 - 5282337 | 17427.2 |
| peptidase m23 | RT97_24400 | Not Available | Positive | 5282466 - 5282969 | 17850.5 |
| hypothetical protein | RT97_24405 | Not Available | Positive | 5283090 - 5283347 | 9920.93 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
