Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxychromene-2-carboxylate isomerase | RT97_24310 | Not Available | Positive | 5268971 - 5269576 | 22152.5 |
| carboxymethylenebutenolidase | RT97_24315 | Not Available | Positive | 5269620 - 5270303 | 24134.7 |
| lysr family transcriptional regulator | RT97_24320 | Not Available | Negative | 5270363 - 5271271 | 33647.7 |
| alpha/beta hydrolase | RT97_24325 | Not Available | Positive | 5271380 - 5271712 | 11276.3 |
| hypothetical protein | RT97_24330 | Not Available | Positive | 5271928 - 5272296 | 12580.7 |
| magnesium transporter cora | RT97_24335 | Not Available | Negative | 5272371 - 5273549 | 44016.1 |
| delta-aminolevulinic acid dehydratase | RT97_24340 | Not Available | Negative | 5273614 - 5274600 | 35655.0 |
| membrane protein | RT97_24345 | Not Available | Positive | 5274969 - 5275397 | 16228.6 |
| teicoplanin resistance protein vanz | RT97_24350 | Not Available | Positive | 5275403 - 5276536 | 40736.4 |
| 2fe-2s ferredoxin | RT97_24355 | Not Available | Positive | 5276580 - 5276933 | 12671.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
