Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | RT97_24260 | Not Available | Positive | 5258918 - 5259748 | 30219.1 |
| abc transporter permease | RT97_24265 | Not Available | Positive | 5259764 - 5260639 | 30649.1 |
| abc transporter permease | RT97_24270 | Not Available | Positive | 5260646 - 5261722 | 38710.2 |
| abc transporter | RT97_24275 | Not Available | Positive | 5261719 - 5262543 | 29918.0 |
| abc transporter atp-binding protein | RT97_24280 | Not Available | Positive | 5262821 - 5263594 | 28591.7 |
| fatty-acid--coa ligase | RT97_24285 | Not Available | Positive | 5263599 - 5265479 | 69773.2 |
| abc transporter substrate-binding protein | RT97_24290 | Not Available | Positive | 5265645 - 5266802 | 42310.9 |
| hypothetical protein | RT97_24295 | Not Available | Positive | 5266957 - 5267418 | 17089.6 |
| membrane protein | RT97_24300 | Not Available | Negative | 5267429 - 5268070 | 22388.3 |
| sugar dehydrogenase | RT97_24305 | Not Available | Negative | 5268085 - 5268831 | 25688.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
