Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein | RT97_24210 | Not Available | Negative | 5249036 - 5249704 | 24533.9 |
| c4-dicarboxylate abc transporter | RT97_24215 | Not Available | Negative | 5249797 - 5250906 | 40538.7 |
| sulfurtransferase | RT97_24220 | Not Available | Positive | 5251127 - 5251537 | 14605.3 |
| peptidase m23b | RT97_24225 | Not Available | Negative | 5251637 - 5252098 | 15737.6 |
| pantothenate kinase | RT97_24230 | Not Available | Positive | 5252233 - 5253009 | 27194.9 |
| 6-aminohexanoate hydrolase | RT97_24235 | Not Available | Negative | 5253022 - 5254350 | 48011.2 |
| enoyl-coa hydratase | RT97_24240 | Not Available | Negative | 5254377 - 5255192 | 29372.5 |
| 3-hydroxybutyryl-coa dehydrogenase | RT97_24245 | Not Available | Negative | 5255313 - 5256161 | 29827.7 |
| phosphoribosylglycinamide formyltransferase | RT97_24250 | Not Available | Positive | 5256346 - 5257557 | 42888.6 |
| acetyl hydrolase | RT97_24255 | Not Available | Positive | 5257863 - 5258804 | 33628.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
