Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transporter | RT97_02385 | Not Available | Positive | 507976 - 509280 | 45630.1 |
| hypothetical protein | RT97_02390 | Not Available | Negative | 509317 - 511053 | 62404.2 |
| histidine kinase | RT97_02395 | Not Available | Negative | 511058 - 511441 | 13891.3 |
| hypothetical protein | RT97_02400 | Not Available | Positive | 511612 - 511980 | 13304.0 |
| pp_00451 | RT97_02405 | Not Available | Positive | 512093 - 513091 | Not Available |
| iclr family transcriptional regulator | RT97_02410 | Not Available | Positive | 513350 - 514135 | 28276.1 |
| gntr family transcriptional regulator | RT97_02415 | Not Available | Negative | 514256 - 514912 | 24564.6 |
| methylmalonyl-coa mutase | RT97_02420 | Not Available | Positive | 515053 - 517215 | 77811.7 |
| gnat family acetyltransferase | RT97_02425 | Not Available | Positive | 517230 - 517739 | 19139.9 |
| transporter | RT97_02435 | Not Available | Positive | 518293 - 519318 | 36356.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
