Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | RT97_24110 | Not Available | Positive | 5227227 - 5228129 | 33103.1 |
| serine/threonine protein kinase | RT97_24115 | Not Available | Negative | 5228120 - 5229154 | 38899.0 |
| hypothetical protein | RT97_24120 | Not Available | Negative | 5229188 - 5230345 | 42096.6 |
| peroxiredoxin | RT97_24125 | Not Available | Negative | 5230472 - 5230897 | 14384.2 |
| marr family transcriptional regulator | RT97_24130 | Not Available | Negative | 5230981 - 5231436 | 16742.6 |
| nodulation protein nodj | RT97_24135 | Not Available | Negative | 5231519 - 5232358 | 30822.6 |
| abc transporter atp-binding protein | RT97_24140 | Not Available | Negative | 5232477 - 5233418 | 34278.4 |
| hypothetical protein | RT97_24145 | Not Available | Positive | 5233545 - 5234387 | 29704.9 |
| hypothetical protein | RT97_24150 | Not Available | Positive | 5234384 - 5235076 | 24270.1 |
| lysr family transcriptional regulator | RT97_24155 | Not Available | Negative | 5235080 - 5235970 | 32893.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
