Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RT97_24060 | Not Available | Positive | 5215088 - 5216053 | 33357.5 |
| hypothetical protein | RT97_24065 | Not Available | Positive | 5216222 - 5217877 | 59908.2 |
| hypothetical protein | RT97_24070 | Not Available | Negative | 5217878 - 5219032 | 42195.5 |
| hypothetical protein | RT97_24075 | Not Available | Negative | 5219041 - 5219802 | 28028.9 |
| hypothetical protein | RT97_24080 | Not Available | Negative | 5219792 - 5220787 | 35246.7 |
| glycosyl transferase | RT97_24085 | Not Available | Negative | 5220784 - 5221812 | 36946.1 |
| udp-glucose 6-dehydrogenase | RT97_24090 | Not Available | Positive | 5221912 - 5223252 | 47876.4 |
| carnitine dehydratase | RT97_24095 | Not Available | Negative | 5223238 - 5224380 | 40602.5 |
| abc transporter substrate-binding protein | RT97_24100 | Not Available | Negative | 5224403 - 5225389 | 34146.1 |
| isovaleryl-coa dehydrogenase | RT97_24105 | Not Available | Negative | 5225415 - 5227136 | 62363.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
