Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porin | RT97_24005 | Not Available | Negative | 5200294 - 5201001 | 23570.9 |
| alcohol dehydrogenase | RT97_24010 | Not Available | Negative | 5201181 - 5202191 | 35256.7 |
| lysr family transcriptional regulator | RT97_24015 | Not Available | Positive | 5202289 - 5203218 | 33847.0 |
| iron abc transporter substrate-binding protein | RT97_24020 | Not Available | Positive | 5203278 - 5204324 | 38030.1 |
| heat shock protein 90 | RT97_24025 | Not Available | Positive | 5204461 - 5206497 | 74532.0 |
| hypothetical protein | RT97_24030 | Not Available | Positive | 5206494 - 5207093 | 18454.3 |
| hypothetical protein | RT97_24035 | Not Available | Positive | 5207146 - 5208495 | 48280.2 |
| atpase | RT97_24045 | Not Available | Positive | 5210042 - 5211121 | 39251.1 |
| hypothetical protein | RT97_24050 | Not Available | Positive | 5211266 - 5213626 | 85450.6 |
| von willebrand factor a | RT97_24055 | Not Available | Positive | 5213778 - 5214989 | 43761.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
