Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acriflavine resistance protein b | RT97_23905 | Not Available | Negative | 5175787 - 5178867 | 109645.0 |
| hemolysin secretion protein d | RT97_23910 | Not Available | Negative | 5178864 - 5179967 | 39018.0 |
| atpase | RT97_23915 | Not Available | Positive | 5180412 - 5180510 | 3539.54 |
| atpase | RT97_23920 | Not Available | Positive | 5180512 - 5182311 | 62450.2 |
| potassium-transporting atpase subunit b | RT97_23925 | Not Available | Positive | 5182432 - 5184531 | 73718.4 |
| potassium-transporting atpase subunit c | RT97_23930 | Not Available | Positive | 5184544 - 5185149 | 20513.4 |
| hypothetical protein | RT97_23935 | Not Available | Positive | 5185246 - 5185578 | 11966.6 |
| sensor protein kdpd | RT97_23940 | Not Available | Positive | 5185720 - 5188464 | 97935.6 |
| transcriptional regulator | RT97_23945 | Not Available | Positive | 5188469 - 5189167 | 25446.4 |
| nadh oxidase | RT97_23950 | Not Available | Negative | 5189196 - 5190326 | 39812.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
