Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein smpa | RT97_23850 | Not Available | Positive | 5161311 - 5161865 | 20206.1 |
| 4-hydroxy-tetrahydrodipicolinate reductase | RT97_23855 | Not Available | Positive | 5162047 - 5162811 | 26763.3 |
| flagellar motor protein mota | RT97_23860 | Not Available | Positive | 5162911 - 5163606 | 23784.2 |
| biopolymer transporter exbd | RT97_23865 | Not Available | Positive | 5163626 - 5164096 | 16154.4 |
| multidrug transporter | RT97_23875 | Not Available | Positive | 5165528 - 5168662 | 111030.0 |
| serine/threonine protein kinase | RT97_23880 | Not Available | Positive | 5169342 - 5171297 | 68512.6 |
| hypothetical protein | RT97_23885 | Not Available | Positive | 5171355 - 5172941 | 55414.4 |
| hypothetical protein | RT97_23890 | Not Available | Positive | 5173083 - 5173832 | 27150.3 |
| hypothetical protein | RT97_23895 | Not Available | Positive | 5173861 - 5175009 | 40616.8 |
| rnd transporter | RT97_23900 | Not Available | Negative | 5175096 - 5175790 | 25015.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
