Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide abc transporter atp-binding protein | RT97_23800 | Not Available | Positive | 5150523 - 5151551 | 37260.7 |
| peptide abc transporter atp-binding protein | RT97_23805 | Not Available | Positive | 5151548 - 5152591 | 37965.3 |
| peptide abc transporter substrate-binding protein | RT97_23810 | Not Available | Positive | 5152632 - 5154263 | 60798.8 |
| s-adenosylhomocysteine nucleosidase | RT97_23815 | Not Available | Positive | 5154267 - 5155031 | 26971.5 |
| magnesium transporter cora | RT97_23820 | Not Available | Negative | 5155024 - 5156010 | 37964.6 |
| atp-dependent dna helicase | RT97_23825 | Not Available | Positive | 5156248 - 5158350 | 77247.2 |
| ribosome hibernation promoting factor | RT97_23830 | Not Available | Positive | 5158668 - 5158997 | 12743.3 |
| pts sugar transporter subunit iia | RT97_23835 | Not Available | Positive | 5159214 - 5159681 | 16363.9 |
| serine kinase | RT97_23840 | Not Available | Positive | 5159823 - 5160782 | 35528.3 |
| fur family transcriptional regulator | RT97_23845 | Not Available | Negative | 5160802 - 5161221 | 15854.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
