Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | RT97_23700 | Not Available | Positive | 5130624 - 5131217 | 21464.0 |
| biotin biosynthesis protein bioc | RT97_23705 | Not Available | Positive | 5131269 - 5131847 | 19820.4 |
| hypothetical protein | RT97_23710 | Not Available | Negative | 5131854 - 5132321 | 17442.6 |
| helicase snf2 | RT97_23715 | Not Available | Positive | 5132576 - 5132956 | 12147.2 |
| isochorismatase | RT97_23720 | Not Available | Positive | 5133071 - 5133652 | 21061.3 |
| hypothetical protein | RT97_23725 | Not Available | Negative | 5133656 - 5134255 | 22065.8 |
| hypothetical protein | RT97_23730 | Not Available | Positive | 5134963 - 5135568 | 22472.2 |
| vanw family protein | RT97_23735 | Not Available | Positive | 5135541 - 5137409 | 66672.1 |
| hypothetical protein | RT97_23740 | Not Available | Positive | 5137406 - 5139079 | 60907.3 |
| alkane 1-monooxygenase | RT97_23745 | Not Available | Positive | 5139125 - 5140102 | 35159.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
