Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent oxidoreductase | RT97_23650 | Not Available | Positive | 5118763 - 5119317 | 19222.0 |
| gntr family transcriptional regulator | RT97_23655 | Not Available | Positive | 5119320 - 5120078 | 28395.1 |
| membrane protein | RT97_23660 | Not Available | Negative | 5120364 - 5121251 | 32237.6 |
| excinuclease abc subunit a | RT97_23665 | Not Available | Negative | 5121267 - 5124383 | 114145.0 |
| single-stranded dna-binding protein | RT97_23670 | Not Available | Positive | 5124553 - 5125116 | 19572.6 |
| histidine kinase | RT97_23675 | Not Available | Positive | 5125260 - 5127224 | 72786.4 |
| transcriptional regulator | RT97_23680 | Not Available | Negative | 5127370 - 5128083 | 25277.0 |
| hypothetical protein | RT97_23685 | Not Available | Positive | 5128259 - 5128882 | 22328.5 |
| phosphonomutase | RT97_23690 | Not Available | Positive | 5128976 - 5129821 | 29275.9 |
| abc transporter | RT97_23695 | Not Available | Positive | 5129891 - 5130631 | 27301.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
