Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_23590 | Not Available | Positive | 5103222 - 5103467 | 8991.19 |
| thiosulfate sulfurtransferase | RT97_23600 | Not Available | Negative | 5104789 - 5105694 | 32828.4 |
| oxidoreductase | RT97_23605 | Not Available | Negative | 5105876 - 5106919 | 38023.1 |
| abc transporter substrate-binding protein | RT97_23610 | Not Available | Negative | 5106934 - 5107860 | 32876.3 |
| abc transporter substrate-binding protein | RT97_23615 | Not Available | Negative | 5107873 - 5108796 | 33021.5 |
| arginine abc transporter atp-binding protein | RT97_23620 | Not Available | Negative | 5108826 - 5109569 | 27025.7 |
| acetyltransferase | RT97_23630 | Not Available | Negative | 5110661 - 5111194 | 20141.0 |
| monooxygenase | RT97_23635 | Not Available | Negative | 5111194 - 5112534 | 48752.3 |
| alkanal monooxygenase | RT97_23640 | Not Available | Negative | 5112580 - 5113471 | 31617.5 |
| hypothetical protein | RT97_23645 | Not Available | Negative | 5113472 - 5118762 | 173648.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
