Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_23480 | Not Available | Negative | 5073060 - 5073371 | 11278.3 |
| membrane protein | RT97_23485 | Not Available | Negative | 5073499 - 5073984 | 18429.8 |
| hypothetical protein | RT97_23490 | Not Available | Negative | 5074285 - 5074527 | 8788.05 |
| iron transporter | RT97_23495 | Not Available | Negative | 5074667 - 5075962 | 45153.9 |
| catalase | RT97_23500 | Not Available | Negative | 5076014 - 5078434 | 86692.7 |
| hypothetical protein | RT97_23505 | Not Available | Positive | 5078689 - 5078919 | 8097.66 |
| atp-dependent dna ligase | RT97_23510 | Not Available | Negative | 5078938 - 5080038 | 40385.6 |
| luxr family transcriptional regulator | RT97_23515 | Not Available | Positive | 5080312 - 5080944 | 23010.9 |
| cardiolipin synthetase | RT97_23520 | Not Available | Positive | 5080967 - 5082247 | 47322.6 |
| hypothetical protein | RT97_23525 | Not Available | Negative | 5082306 - 5083235 | 32486.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
