Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dehydrogenase | RT97_23310 | Not Available | Negative | 5023045 - 5025363 | 82277.7 |
| molybdopterin dehydrogenase | RT97_23315 | Not Available | Negative | 5025360 - 5026346 | 35141.0 |
| hypothetical protein | RT97_23325 | Not Available | Negative | 5027040 - 5027981 | 34296.9 |
| gamma-glutamyltransferase | RT97_23330 | Not Available | Positive | 5028075 - 5029910 | 66022.5 |
| abc transporter substrate-binding protein | RT97_23335 | Not Available | Positive | 5029955 - 5030920 | 34014.5 |
| hypothetical protein | RT97_23340 | Not Available | Positive | 5030949 - 5031446 | 17821.6 |
| hypothetical protein | RT97_23345 | Not Available | Negative | 5031502 - 5031798 | 10291.8 |
| hypothetical protein | RT97_23350 | Not Available | Positive | 5031827 - 5034139 | 79732.8 |
| proline dioxygenase | RT97_23355 | Not Available | Negative | 5034167 - 5035054 | 31906.9 |
| hypothetical protein | RT97_23360 | Not Available | Negative | 5035085 - 5035711 | 22386.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
