Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| luxr family transcriptional regulator | RT97_23260 | Not Available | Positive | 5012272 - 5013030 | 27716.4 |
| hypothetical protein | RT97_23265 | Not Available | Positive | 5013312 - 5014589 | 46696.6 |
| hypothetical protein | RT97_23270 | Not Available | Positive | 5014586 - 5016238 | 59779.0 |
| hypothetical protein | RT97_23275 | Not Available | Positive | 5016256 - 5016603 | 12882.2 |
| hypothetical protein | RT97_23280 | Not Available | Positive | 5016615 - 5018795 | 76181.3 |
| hypothetical protein | RT97_23285 | Not Available | Positive | 5018812 - 5020344 | 52731.1 |
| nad(p)h dehydrogenase | RT97_23290 | Not Available | Negative | 5020397 - 5021032 | 22636.6 |
| tetr family transcriptional regulator | RT97_23295 | Not Available | Positive | 5021094 - 5021702 | 21650.2 |
| hypothetical protein | RT97_23300 | Not Available | Positive | 5021814 - 5022140 | 11729.9 |
| exodeoxyribonuclease iii | RT97_23305 | Not Available | Positive | 5022246 - 5023028 | 28746.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
