Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | RT97_23150 | Not Available | Positive | 4979627 - 4980958 | 49489.9 |
| glycerol-3-phosphate transporter permease | RT97_23155 | Not Available | Positive | 4980985 - 4981890 | 33092.2 |
| abc transporter permease | RT97_23160 | Not Available | Positive | 4981912 - 4982832 | 33869.9 |
| glycerophosphodiester phosphodiesterase | RT97_23165 | Not Available | Positive | 4982865 - 4983617 | 27026.7 |
| alkaline phosphatase | RT97_23170 | Not Available | Positive | 4983614 - 4985161 | 56193.2 |
| alcohol dehydrogenase | RT97_23175 | Not Available | Positive | 4985251 - 4986261 | 37041.4 |
| tetr family transcriptional regulator | RT97_23180 | Not Available | Positive | 4986354 - 4986852 | 17989.5 |
| acyl-coa dehydrogenase | RT97_23185 | Not Available | Positive | 4986921 - 4988717 | 65010.4 |
| hypothetical protein | RT97_23190 | Not Available | Positive | 4988757 - 4989191 | 15653.6 |
| 3-hydroxyacyl-coa dehydrogenase | RT97_23195 | Not Available | Positive | 4989299 - 4991704 | 85838.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
