Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | RT97_23100 | Not Available | Negative | 4969783 - 4970277 | 18443.1 |
| nadph-dependent fmn reductase | RT97_23105 | Not Available | Negative | 4970446 - 4970829 | 13694.2 |
| hypothetical protein | RT97_23110 | Not Available | Positive | 4970830 - 4971163 | 11913.5 |
| urea abc transporter permease | RT97_23115 | Not Available | Positive | 4971303 - 4972850 | 54562.1 |
| amino acid abc transporter permease | RT97_23120 | Not Available | Positive | 4972972 - 4974198 | 44400.3 |
| urea abc transporter atp-binding protein | RT97_23125 | Not Available | Positive | 4974195 - 4975073 | 31728.2 |
| urea abc transporter atp-binding protein | RT97_23130 | Not Available | Positive | 4975086 - 4975778 | 25250.1 |
| mfs transporter | RT97_23135 | Not Available | Positive | 4975910 - 4977169 | 42497.8 |
| deor faimly transcriptional regulator | RT97_23140 | Not Available | Negative | 4977145 - 4978110 | 34749.4 |
| glycerol-1-phosphate dehydrogenase | RT97_23145 | Not Available | Positive | 4978243 - 4979595 | 47769.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
