Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2,3-dimethylmalate lyase | RT97_23045 | Not Available | Negative | 4951290 - 4952174 | 32072.9 |
| hypothetical protein | RT97_23050 | Not Available | Positive | 4952468 - 4953487 | 36251.0 |
| hypothetical protein | RT97_23055 | Not Available | Negative | 4953653 - 4955398 | 58263.7 |
| hypothetical protein | RT97_23060 | Not Available | Positive | 4955977 - 4958952 | 111725.0 |
| luxr family transcriptional regulator | RT97_23070 | Not Available | Negative | 4959727 - 4960365 | 22808.8 |
| chemotaxis protein chey | RT97_23075 | Not Available | Negative | 4960374 - 4960733 | 13145.8 |
| hypothetical protein | RT97_23080 | Not Available | Negative | 4960920 - 4961891 | 33716.2 |
| hypothetical protein | RT97_23085 | Not Available | Positive | 4962196 - 4967661 | 201522.0 |
| multidrug mfs transporter | RT97_23090 | Not Available | Positive | 4967780 - 4969120 | 48767.0 |
| hypothetical protein | RT97_23095 | Not Available | Negative | 4969192 - 4969599 | 14169.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
