Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plastocyanin | RT97_22785 | Not Available | Negative | 4895332 - 4895847 | 18736.8 |
| copper oxidase | RT97_22790 | Not Available | Negative | 4895881 - 4897254 | 50018.2 |
| transporter | RT97_22795 | Not Available | Negative | 4897256 - 4898731 | 52831.9 |
| hypothetical protein | RT97_22800 | Not Available | Negative | 4898809 - 4899231 | 14216.0 |
| hypothetical protein | RT97_22805 | Not Available | Negative | 4899256 - 4899534 | 9812.61 |
| glycerophosphodiester phosphodiesterase | RT97_22810 | Not Available | Negative | 4899531 - 4900523 | 35303.4 |
| membrane protein | RT97_22815 | Not Available | Negative | 4900520 - 4901101 | 21067.5 |
| gcn5 family acetyltransferase | RT97_22820 | Not Available | Negative | 4901174 - 4901662 | 18182.5 |
| cell division protein zipa | RT97_22825 | Not Available | Negative | 4901678 - 4902163 | 17397.0 |
| amino acid abc transporter atp-binding protein | RT97_22830 | Not Available | Negative | 4902359 - 4903144 | 28432.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
