Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic compound catabolic protein | RT97_22680 | Not Available | Negative | 4872745 - 4873293 | 19333.5 |
| marr family transcriptional regulator | RT97_22685 | Not Available | Positive | 4873369 - 4873824 | 16696.0 |
| mfs transporter | RT97_22690 | Not Available | Positive | 4873930 - 4875246 | 46650.3 |
| multidrug transporter mate | RT97_22695 | Not Available | Positive | 4875266 - 4876684 | 48820.1 |
| short-chain dehydrogenase | RT97_22700 | Not Available | Positive | 4876714 - 4877430 | 23949.4 |
| signal peptide protein | RT97_22705 | Not Available | Negative | 4877488 - 4877808 | 12352.5 |
| hypothetical protein | RT97_22710 | Not Available | Negative | 4878021 - 4878758 | 26564.8 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | RT97_22715 | Not Available | Negative | 4878807 - 4879448 | 21820.8 |
| 2-dehydro-3-deoxygalactonokinase | RT97_22720 | Not Available | Negative | 4879445 - 4880365 | 32556.1 |
| dihydroxy-acid dehydratase | RT97_22725 | Not Available | Negative | 4880367 - 4882103 | 62874.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
