Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxalase | RT97_02210 | Not Available | Negative | 473135 - 473521 | 13895.5 |
| esterase | RT97_02215 | Not Available | Negative | 473659 - 474540 | 31186.0 |
| hypothetical protein | RT97_02220 | Not Available | Positive | 474800 - 475195 | 14848.3 |
| luxr family transcriptional regulator | RT97_02225 | Not Available | Negative | 475212 - 476687 | 52957.9 |
| membrane protein | RT97_02230 | Not Available | Positive | 476866 - 477456 | 21024.9 |
| hypothetical protein | RT97_02235 | Not Available | Negative | 477619 - 477891 | 9890.53 |
| hypothetical protein | RT97_02240 | Not Available | Positive | 478393 - 479385 | 37322.3 |
| patatin | RT97_02245 | Not Available | Positive | 479548 - 480564 | 35653.1 |
| hypothetical protein | RT97_02250 | Not Available | Positive | 480684 - 481364 | 22606.4 |
| lactoylglutathione lyase | RT97_02255 | Not Available | Positive | 481381 - 481800 | 15047.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
