Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax paradoxus |
| Strain | strain MEDvA23 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | mine spoil; soil |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1135217 bp
Thymine Count
1134728 bp
Guanine Count
2318338 bp
Cytosine Count
2318226 bp
Genome Length
6906509 bp
Protein-coding Genes
6027 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide methionine sulfoxide reductase | RT97_22575 | Not Available | Positive | 4852208 - 4852759 | 20235.7 |
| hypothetical protein | RT97_22580 | Not Available | Positive | 4852784 - 4853179 | 13790.7 |
| ligand-gated channel protein | RT97_22585 | Not Available | Positive | 4853258 - 4855363 | 75401.1 |
| transporter | RT97_22590 | Not Available | Positive | 4855509 - 4856459 | 33464.6 |
| flagellar motor protein motb | RT97_22600 | Not Available | Positive | 4856996 - 4858198 | 43477.9 |
| pyridoxamine 5'-phosphate oxidase | RT97_22605 | Not Available | Negative | 4858205 - 4858858 | 24638.0 |
| molybdopterin-guanine dinucleotide biosynthesis protein moba | RT97_22610 | Not Available | Positive | 4858888 - 4859463 | 19668.8 |
| superoxide dismutase | RT97_22615 | Not Available | Negative | 4859472 - 4860011 | 18056.2 |
| calcium transporter chac | RT97_22620 | Not Available | Negative | 4860008 - 4860712 | 25813.6 |
| membrane protein | RT97_22625 | Not Available | Positive | 4860854 - 4861417 | 19161.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
